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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909579.1_cds_XP_016459768.1_53259
CDS Infomation

[gene=LOC107783309] [db_xref=GeneID:107783309] [protein=oxalate--CoA ligase-like] [protein_id=XP_016459768.1] [location=complement(join(34798..35016,36528..36631,37788..38835,39019..39219))] [gbkey=CDS]
Sequence

ATGGCGAGTTCCACACTCACTGGATTGTTGAAACATGTCGCCGAAAAATTCCCTTCTCAT
CGTGCGATTTCCATTTCTGGAAAGTTTGATATTACTCATGCACGGCTTCAAGAACTCGTT
GAACGTGCTGCTTCTCAACTTGTATCTGCCGGCGTAAAGCACGGCGATGTCGTTGCACTC
ACTTTCCCCAACACTATCGAGTTCGTGATCATGTTTCTAGCTGTAACTCGAGTACGAGCT
ACGGCGGCGCCACTGAATTCAGCTTACATGGCCGAAGAATTCGAGTTCTATTTATCCGAT
TCAGAATCGAAACTCTTAATAACTGGAAAAGAAGGAAATGAAGCGGCTCAAACAGCAGCT
TCCAAGCTGAAAATCCGTCATATTACTGCAACTCTGCCTCAAGCCGACTCTGGTGTCACT
TTTTCCCCTGCTCCTTCCGGGTCGGACCTTGAATCAGTGTCCAAAATTGTTAACGACCCG
TCGGATGTTGGACTTTTCCTTCATACGTCAGGCACCACGAGCCGACCAAAAGGTGTTCCT
CTGACTCAGCTAAATTTAGCATCTTCAGTGAATAATATCAAATCGGTGTATAAATTGAGT
GACTCGGATTCAACGGTGATCGTGTTGCCGTTATTTCATGTGCACGGGTTAATTGCCGGG
TTACTGAGTTCACTCGGAGCCGGAGCATCCGTAACACTTCCTTCCGCTGGGAGATTTTCT
GCTTCAACTTTCTGGCCAGATATGAAAAAATACAACGCCACGTGGTACACGGCTGTACCT
ACAATTCACCAGATTCTTTTGGATTGCCACCTCAGCAAACCCGAATCCGATTACCCGAAG
CTCCGGTTCATTCGGAGTTGCAGTGCAGCACTAGCTCCATCAGTGATGGCCAGGTTAGAG
GAAGCATTCGGGGCTCCTGTTTTGGAGGCGTATGCGATGACAGAGGCGACCCATTTGATG
GCTTCGAACCCGTTACCCGAAAATGGCCCGCATATACCCGGGTCGGTTGGGAAACCCGTG
GGTCAAGAGATGGCTATATTGGATGAGAATGGTGTGGTACAAGGTGCTAATGCTAAGGGA
GAGGTTTGCATTAGAGGTCCAAATGTAACTAAAGGGTATAAGAATAATCCTGAGGCTAAT
AAATCAGCTTTCCAGTTTGGTTGGTTTCACACTGGTGATGTGGGGTATTTGGACTCTGAT
GGATATTTGCATTTGGTTGGCAGAATTAAGGAATTAATCAACCGTGGAGGGGAGAAAATA
TCACCTATTGAAGTGGATGCAGTACTGGTTTCTCATGCGGAAATTGCTCAGGCGGTTGCT
TTTGGCGTTCCTGACGACAAGTATGGTGAAGAGATAAACTGTGCAGTTATTCCAAGAGAA
GGGTCAAACATTGATGAGGCAGAGGTGCTGAGATTTTGTAAGAAGAATCTCGCAGCTTTT
AAGGTCCCAAAGAAGGTTTTCATGACTGACTCTCTACCAAAGACTGCAACAGGAAAAATT
CAACGACGACTTGTTGCAGAGCACTTCCTAGCACAGATTTCAACTGCTAAAGTCCCCAAG
TTCGGAGCTTAG

Peptide Sequence

PEP ID

XP_016459768.1
PEP Infomation

PREDICTED: oxalate--CoA ligase-like [Nicotiana tabacum]
Sequence

MASSTLTGLLKHVAEKFPSHRAISISGKFDITHARLQELVERAASQLVSAGVKHGDVVAL
TFPNTIEFVIMFLAVTRVRATAAPLNSAYMAEEFEFYLSDSESKLLITGKEGNEAAQTAA
SKLKIRHITATLPQADSGVTFSPAPSGSDLESVSKIVNDPSDVGLFLHTSGTTSRPKGVP
LTQLNLASSVNNIKSVYKLSDSDSTVIVLPLFHVHGLIAGLLSSLGAGASVTLPSAGRFS
ASTFWPDMKKYNATWYTAVPTIHQILLDCHLSKPESDYPKLRFIRSCSAALAPSVMARLE
EAFGAPVLEAYAMTEATHLMASNPLPENGPHIPGSVGKPVGQEMAILDENGVVQGANAKG
EVCIRGPNVTKGYKNNPEANKSAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKI
SPIEVDAVLVSHAEIAQAVAFGVPDDKYGEEINCAVIPREGSNIDEAEVLRFCKKNLAAF
KVPKKVFMTDSLPKTATGKIQRRLVAEHFLAQISTAKVPKFGA

Transcript Sequence

Gene sequence data has not been registered.